| First round | | Sun | 2007-10-14 | 14:30 | Madagascar mg | 6–2 | km Comoros | 7,754 | Stade Municipal de Mahamasina | | Match Report | Leg 1 of 2 |
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| First round | | Wed | 2007-10-17 | 16:30 | Sierra Leone sl | 1–0 | gw Guinea-Bissau | 25,000 | Siaka Stevens Stadium | | Match Report | Leg 1 of 2 |
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| First round | | Fri | 2007-11-16 | 16:00 | Djibouti dj | 1–0 | so Somalia | 10,000 | Stade El Hadj Hassan Gouled | | Match Report | Leg 1 of 2 |
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| First round | | Sat | 2007-11-17 | 15:00 | Comoros km | 0–4 | mg Madagascar | 1,610 | Stade International Saïd Mohamed Cheikh | | Match Report | Leg 2 of 2; Madagascar won |
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| First round | | Sat | 2007-11-17 | 16:30 | Guinea-Bissau gw | 0–0 | sl Sierra Leone | 12,000 | Estadio 24 de Setembro | | Match Report | Leg 2 of 2; Sierra Leone won |
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| Second round | 1 | Sat | 2008-05-31 | 14:30 | Malawi mw | 8–1 | dj Djibouti | 35,000 | Kamuzu Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 15:00 | Botswana bw | 0–0 | mg Madagascar | 11,087 | Botswana National Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 15:30 | Cameroon cm | 2–0 | cv Cape Verde | 20,000 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 15:30 | Togo tg | 1–0 | zm Zambia | 15,000 | Accra Sports Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 15:30 | Rwanda rw | 3–0 | mr Mauritania | 12,000 | Stade Régional de Nyamirambo | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 16:00 | Uganda ug | 1–0 | ne Niger | 25,000 | Nelson Mandela National Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 16:00 | Tanzania tz | 1–1 | mu Mauritius | 35,000 | Benjamin Mkapa National Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 16:00 | Namibia na | 2–1 | ke Kenya | 6,000 | Sam Nujoma Stadium | | Match Report | |
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| Second round | 1 | Sat | 2008-05-31 | 19:00 | Morocco ma | | et Ethiopia | | | | Match Report | Match Cancelled |
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| Second round | 1 | Sat | 2008-05-31 | 19:30 | Senegal sn | 1–0 | dz Algeria | 55,000 | Stade Léopold Sédar Senghor | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 15:30 | Burundi bi | 1–0 | sc Seychelles | 4,000 | Stade Prince Louis Rwagasore | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 15:30 | Angola ao | 3–0 | bj Benin | 6,000 | Estádio Municipal dos Coqueiros | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 15:30 | Equ. Guinea gq | 2–0 | sl Sierra Leone | 13,000 | Nuevo Estadio de Malabo | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 16:00 | Nigeria ng | 2–0 | za South Africa | 50,000 | Abuja National Stadium | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 16:00 | Liberia lr | 1–1 | gm Gambia | 20,000 | Samuel Kanyon Doe Sports Complex | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 16:00 | Côte d'Ivoire ci | 1–0 | mz Mozambique | 20,000 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 17:00 | Guinea gn | 0–0 | zw Zimbabwe | 12,000 | Stade du 28 Septembre | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 17:00 | Ghana gh | 3–0 | ly Libya | 31,000 | Baba Yara Stadium | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 18:00 | Mali ml | 4–2 | cg Congo | 40,000 | Stade du 26 Mars | | Match Report | |
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| Round | Wk | Day | Date | Time | Home | Score | Away | Attendance | Venue | Referee | Match Report | Notes |
| Second round | 1 | Sun | 2008-06-01 | 19:10 | Tunisia tn | 1–2 | bf Burkina Faso | 15,000 | Stade Olympique de Radès | | Match Report | |
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| Second round | 1 | Sun | 2008-06-01 | 21:00 | Egypt eg | 2–1 | cd Congo DR | 40,000 | Cairo International Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 2 | Fri | 2008-06-06 | 15:00 | Djibouti dj | 0–4 | eg Egypt | 6,000 | Stade El Hadj Hassan Gouled | | Match Report | |
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| Second round | 2 | Fri | 2008-06-06 | 19:30 | Algeria dz | 3–0 | lr Liberia | 22,000 | Stade Mustapha Tchaker | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 14:30 | Sierra Leone sl | 0–1 | ng Nigeria | 25,000 | Siaka Stevens Stadium | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 15:00 | South Africa za | 4–1 | gq Equ. Guinea | 10,000 | Lucas Masterpieces Moripe Stadium | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 16:00 | Cape Verde cv | 1–0 | tz Tanzania | 6,000 | Estádio da Várzea | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 16:00 | Kenya ke | 2–0 | gn Guinea | 35,000 | Nyayo National Stadium | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 16:00 | Chad td | 1–2 | ml Mali | 15,000 | Stade Omnisports Idriss Mahamat Ouya | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 16:30 | Seychelles sc | 0–2 | tn Tunisia | 2,033 | Stade Linité | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 17:00 | Mauritania mr | 1–4 | ma Morocco | 9,500 | Stade Olympique de Nouakchott | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 18:00 | Burkina Faso bf | 2–0 | bi Burundi | 10,000 | Stade du 4 Août | | Match Report | |
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| Second round | 2 | Sat | 2008-06-07 | 20:00 | Libya ly | 1–0 | ga Gabon | 30,000 | 11 June Stadium | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 14:30 | Madagascar mg | 0–0 | ci Côte d'Ivoire | 15,000 | Stade Municipal de Mahamasina | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:00 | Eswatini sz | 2–1 | tg Togo | 5,819 | Somhlolo National Stadium | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:00 | Mauritius mu | 0–3 | cm Cameroon | 2,400 | New George V Stadium | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:00 | Mozambique mz | 1–2 | bw Botswana | 30,000 | Estádio da Machava | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:00 | Zimbabwe zw | 2–0 | na Namibia | 27,979 | Rufaro Stadium | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:30 | Congo cg | 1–0 | sd Sudan | 25,000 | Stade Alphonse Massamba-Débat | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 15:30 | Congo DR cd | 1–0 | mw Malawi | 35,000 | Stade des Martyrs de la Pentecôte | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 16:00 | Ethiopia et | | rw Rwanda | | | | Match Report | Match Cancelled |
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| Second round | 2 | Sun | 2008-06-08 | 16:00 | Benin bj | 4–1 | ug Uganda | 10,200 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 16:00 | Niger ne | 1–2 | ao Angola | 23,000 | Stade Général Seyni Kountché | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 17:00 | Gambia gm | 0–0 | sn Senegal | 24,500 | Independence Stadium | | Match Report | |
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| Second round | 2 | Sun | 2008-06-08 | 18:00 | Lesotho ls | 2–3 | gh Ghana | 19,000 | Dr. Petrus Molemela Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 3 | Fri | 2008-06-13 | 15:00 | Djibouti dj | 0–6 | cd Congo DR | 3,000 | Stade El Hadj Hassan Gouled | | Match Report | |
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| Second round | 3 | Fri | 2008-06-13 | 17:00 | Mauritania mr | | et Ethiopia | | | | Match Report | Match Cancelled |
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| Second round | 3 | Sat | 2008-06-14 | 14:30 | Sierra Leone sl | 1–0 | za South Africa | 15,000 | Siaka Stevens Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 14:30 | Malawi mw | 1–0 | eg Egypt | 40,000 | Kamuzu Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 15:00 | Namibia na | 1–2 | gn Guinea | 5,000 | Sam Nujoma Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 15:00 | Botswana bw | 1–1 | ci Côte d'Ivoire | 21,400 | Botswana National Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 15:30 | Gabon ga | 2–0 | gh Ghana | 39,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 15:30 | Rwanda rw | 3–1 | ma Morocco | 12,000 | Stade Régional de Nyamirambo | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:00 | Chad td | 2–1 | cg Congo | 8,000 | Stade Omnisports Idriss Mahamat Ouya | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:00 | Niger ne | 0–2 | bj Benin | 5,000 | Stade Général Seyni Kountché | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:00 | Uganda ug | 3–1 | ao Angola | 20,000 | Nelson Mandela National Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:00 | Tanzania tz | 0–0 | cm Cameroon | 55,000 | Benjamin Mkapa National Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:00 | Kenya ke | 2–0 | zw Zimbabwe | 27,500 | Nyayo National Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 16:30 | Seychelles sc | 2–3 | bf Burkina Faso | 1,000 | Stade Linité | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 17:00 | Gambia gm | 1–0 | dz Algeria | 18,000 | Independence Stadium | | Match Report | |
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| Second round | 3 | Sat | 2008-06-14 | 20:00 | Sudan sd | 3–2 | ml Mali | 15,000 | Khartoum Stadium | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 14:30 | Madagascar mg | 1–1 | mz Mozambique | 15,501 | Stade Municipal de Mahamasina | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 15:00 | Eswatini sz | 0–0 | zm Zambia | 7,462 | Somhlolo National Stadium | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 15:00 | Burundi bi | 0–1 | tn Tunisia | 7,000 | Stade Prince Louis Rwagasore | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 15:00 | Mauritius mu | 0–1 | cv Cape Verde | 1,480 | New George V Stadium | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 15:00 | Lesotho ls | 0–1 | ly Libya | 9,000 | Dr. Petrus Molemela Stadium | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 15:30 | Equ. Guinea gq | 0–1 | ng Nigeria | 15,200 | Nuevo Estadio de Malabo | | Match Report | |
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| Second round | 3 | Sun | 2008-06-15 | 16:00 | Liberia lr | 2–2 | sn Senegal | 25,000 | Samuel Kanyon Doe Sports Complex | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 4 | Fri | 2008-06-20 | 19:30 | Algeria dz | 1–0 | gm Gambia | 24,000 | Stade Mustapha Tchaker | | Match Report | |
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| Second round | 4 | Fri | 2008-06-20 | 21:00 | Libya ly | 4–0 | ls Lesotho | 30,000 | 11 June Stadium | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 14:00 | Zambia zm | 1–0 | sz Eswatini | 14,458 | Konkola Stadium | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 15:00 | South Africa za | 0–0 | sl Sierra Leone | 12,000 | Lucas Masterpieces Moripe Stadium | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 15:30 | Cameroon cm | 2–1 | tz Tanzania | 25,000 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 16:00 | Nigeria ng | 2–0 | gq Equ. Guinea | 20,000 | Abuja National Stadium | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 18:00 | Burkina Faso bf | 4–1 | sc Seychelles | 12,500 | Stade du 4 Août | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 19:00 | Morocco ma | 2–0 | rw Rwanda | 2,500 | Stade Mohamed V | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 19:30 | Senegal sn | 3–1 | lr Liberia | 40,000 | Stade Léopold Sédar Senghor | | Match Report | |
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| Second round | 4 | Sat | 2008-06-21 | 20:30 | Tunisia tn | 2–1 | bi Burundi | 6,000 | Stade Olympique de Radès | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 14:30 | Mali ml | 3–0 | sd Sudan | 25,000 | Stade du 26 Mars | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 15:00 | Mozambique mz | 3–0 | mg Madagascar | 20,000 | Estádio da Machava | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 15:00 | Zimbabwe zw | 0–0 | ke Kenya | 23,000 | Rufaro Stadium | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 15:30 | Congo DR cd | 5–1 | dj Djibouti | 15,000 | Stade des Martyrs de la Pentecôte | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 16:00 | Ethiopia et | | mr Mauritania | | | | Match Report | Match Cancelled |
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| Second round | 4 | Sun | 2008-06-22 | 16:00 | Côte d'Ivoire ci | 4–0 | bw Botswana | 15,000 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 16:00 | Benin bj | 2–0 | ne Niger | 25,000 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 16:00 | Cape Verde cv | 3–1 | mu Mauritius | 2,850 | Estádio da Várzea | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 17:00 | Ghana gh | 2–0 | ga Gabon | 29,040 | Accra Sports Stadium | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 17:00 | Guinea gn | 4–0 | na Namibia | 15,000 | Stade du 28 Septembre | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 19:00 | Congo cg | 2–0 | td Chad | 8,000 | Stade Alphonse Massamba-Débat | | Match Report | |
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| Second round | 4 | Sun | 2008-06-22 | 21:00 | Egypt eg | 2–0 | mw Malawi | 20,000 | Cairo International Stadium | | Match Report | |
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| Second round | 4 | Mon | 2008-06-23 | 15:30 | Angola ao | 0–0 | ug Uganda | 7,500 | Estádio Municipal dos Coqueiros | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 1 | Sat | 2008-06-28 | 15:30 | Gabon ga | 2–0 | ls Lesotho | 15,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 5 | Fri | 2008-09-05 | 21:00 | Djibouti dj | 0–3 | mw Malawi | 700 | Stade El Hadj Hassan Gouled | | Match Report | |
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| Second round | 5 | Fri | 2008-09-05 | 22:00 | Libya ly | 1–0 | gh Ghana | 45,000 | 11 June Stadium | | Match Report | |
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| Second round | 5 | Fri | 2008-09-05 | 22:00 | Algeria dz | 3–2 | sn Senegal | 25,000 | Stade Mustapha Tchaker | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 15:00 | Mauritius mu | 1–4 | tz Tanzania | 103 | New George V Stadium | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 15:00 | South Africa za | 0–1 | ng Nigeria | 25,000 | Telkom Park Rugby Stadium | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 16:00 | Cape Verde cv | 1–2 | cm Cameroon | 5,000 | Estádio da Várzea | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 16:00 | Kenya ke | 1–0 | na Namibia | 40,000 | Safaricom Stadium Kasarani | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 16:30 | Sierra Leone sl | 2–1 | gq Equ. Guinea | 22,000 | Siaka Stevens Stadium | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 16:30 | Gambia gm | 3–0 | lr Liberia | 10,000 | Independence Stadium | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 16:30 | Seychelles sc | 1–2 | bi Burundi | 3,000 | Stade Linité | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 17:00 | Mauritania mr | 0–1 | rw Rwanda | 1,000 | Stade Olympique de Nouakchott | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 18:00 | Burkina Faso bf | 0–0 | tn Tunisia | 10,000 | Stade du 4 Août | | Match Report | |
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| Second round | 5 | Sat | 2008-09-06 | 22:00 | Sudan sd | 1–2 | td Chad | 4,000 | Cairo Military Academy Stadium (Neutral Site) | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 14:30 | Madagascar mg | 1–0 | bw Botswana | 20,000 | Stade Municipal de Mahamasina | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 15:00 | Mozambique mz | 1–1 | ci Côte d'Ivoire | 35,000 | Estádio da Machava | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 15:00 | Lesotho ls | 0–3 | ga Gabon | 1,500 | Dr. Petrus Molemela Stadium | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 15:00 | Zimbabwe zw | 0–0 | gn Guinea | 23,000 | Rufaro Stadium | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 15:30 | Congo DR cd | 0–1 | eg Egypt | 80,000 | Stade des Martyrs de la Pentecôte | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 15:30 | Congo cg | 1–0 | ml Mali | 16,000 | Stade Alphonse Massamba-Débat | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 16:00 | Ethiopia et | | ma Morocco | | | | Match Report | Match Cancelled |
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| Second round | 5 | Sun | 2008-09-07 | 16:00 | Benin bj | 3–2 | ao Angola | 30,000 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Second round | 5 | Sun | 2008-09-07 | 16:30 | Niger ne | 3–1 | ug Uganda | 5,000 | Stade Général Seyni Kountché | | Match Report | |
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| Second round | 5 | Wed | 2008-09-10 | 14:00 | Zambia zm | 1–0 | tg Togo | 10,500 | Konkola Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 1 | Wed | 2008-09-10 | 22:00 | Chad td | 1–3 | sd Sudan | 10,000 | Cairo Military Academy Stadium (Neutral Site) | | Match Report | |
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| | | | | | | | | | | | |
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| Second round | 6 | Sat | 2008-10-11 | 14:30 | Côte d'Ivoire ci | 3–0 | mg Madagascar | 24,000 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 14:30 | Malawi mw | 2–1 | cd Congo DR | 50,000 | Kamuzu Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 14:30 | Ghana gh | 3–0 | ls Lesotho | 20,000 | Essipong Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 15:30 | Rwanda rw | | et Ethiopia | | | | Match Report | Match Cancelled |
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| Second round | 6 | Sat | 2008-10-11 | 15:30 | Togo tg | 6–0 | sz Eswatini | 8,000 | Accra Sports Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 15:30 | Gabon ga | 1–0 | ly Libya | 25,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 15:30 | Cameroon cm | 5–0 | mu Mauritius | 12,000 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Senegal sn | 1–1 | gm Gambia | 50,000 | Stade Léopold Sédar Senghor | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Equ. Guinea gq | 0–1 | za South Africa | 6,500 | Nuevo Estadio de Malabo | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Nigeria ng | 4–1 | sl Sierra Leone | 20,000 | Abuja National Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Tanzania tz | 3–1 | cv Cape Verde | 10,000 | Benjamin Mkapa National Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Liberia lr | 0–0 | dz Algeria | 2,000 | Samuel Kanyon Doe Sports Complex | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:00 | Namibia na | 4–2 | zw Zimbabwe | 4,000 | Sam Nujoma Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 16:30 | Botswana bw | 0–1 | mz Mozambique | 2,000 | Botswana National Stadium | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 17:00 | Tunisia tn | 5–0 | sc Seychelles | 10,000 | Stade Olympique de Radès | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 18:00 | Mali ml | 2–1 | td Chad | 40,000 | Stade du 26 Mars | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 19:30 | Morocco ma | 4–1 | mr Mauritania | 1,472 | Stade Prince Moulay Abdallah | | Match Report | |
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| Second round | 6 | Sat | 2008-10-11 | 21:00 | Sudan sd | 2–0 | cg Congo | 27,000 | Al-Merreikh Stadium | | Match Report | |
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| Second round | 6 | Sun | 2008-10-12 | 15:30 | Burundi bi | 1–3 | bf Burkina Faso | 10,000 | Stade Prince Louis Rwagasore | | Match Report | |
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| Second round | 6 | Sun | 2008-10-12 | 16:00 | Angola ao | 3–1 | ne Niger | 3,200 | Estádio Municipal dos Coqueiros | | Match Report | |
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| Second round | 6 | Sun | 2008-10-12 | 16:00 | Uganda ug | 2–1 | bj Benin | 2,913 | Nelson Mandela National Stadium | | Match Report | |
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| Second round | 6 | Sun | 2008-10-12 | 16:15 | Guinea gn | 3–2 | ke Kenya | 16,400 | Stade du 28 Septembre | | Match Report | |
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| Second round | 6 | Sun | 2008-10-12 | 20:00 | Egypt eg | 4–0 | dj Djibouti | 10,000 | Cairo Military Academy Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 1 | Sat | 2009-03-28 | 15:30 | Rwanda rw | 0–0 | dz Algeria | 22,000 | Stade Amahoro | | Match Report | |
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| Third round | 1 | Sat | 2009-03-28 | 16:00 | Togo tg | 1–0 | cm Cameroon | 26,450 | Accra Sports Stadium | | Match Report | |
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| Third round | 1 | Sat | 2009-03-28 | 16:00 | Kenya ke | 1–2 | tn Tunisia | 27,000 | Nyayo National Stadium | | Match Report | |
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| Third round | 1 | Sat | 2009-03-28 | 18:00 | Burkina Faso bf | 4–2 | gn Guinea | 30,000 | Stade du 4 Août | | Match Report | |
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| Third round | 1 | Sat | 2009-03-28 | 20:00 | Sudan sd | 1–1 | ml Mali | 35,000 | Al-Merreikh Stadium | | Match Report | |
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| Third round | 1 | Sun | 2009-03-29 | 14:00 | Mozambique mz | 0–0 | ng Nigeria | 35,000 | Estádio da Machava | | Match Report | |
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| Third round | 1 | Sun | 2009-03-29 | 16:00 | Ghana gh | 1–0 | bj Benin | 39,000 | Baba Yara Stadium | | Match Report | |
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| Third round | 1 | Sun | 2009-03-29 | 16:00 | Côte d'Ivoire ci | 5–0 | mw Malawi | 34,000 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Third round | 1 | Sun | 2009-03-29 | 18:30 | Egypt eg | 1–1 | zm Zambia | 70,000 | Cairo International Stadium | | Match Report | |
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| Third round | 1 | Sun | 2009-03-29 | 19:00 | Morocco ma | 1–2 | ga Gabon | 38,000 | Stade Mohamed V | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 2 | Sat | 2009-06-06 | 14:00 | Zambia zm | 1–0 | rw Rwanda | 28,000 | Konkola Stadium | | Match Report | |
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| Third round | 2 | Sat | 2009-06-06 | 14:30 | Malawi mw | 0–1 | bf Burkina Faso | 25,000 | Kamuzu Stadium | | Match Report | |
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| Third round | 2 | Sat | 2009-06-06 | 15:30 | Gabon ga | 3–0 | tg Togo | 20,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | Match awarded to Gabon |
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| Third round | 2 | Sat | 2009-06-06 | 18:00 | Tunisia tn | 2–0 | mz Mozambique | 30,000 | Stade Olympique de Radès | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 15:30 | Cameroon cm | 0–0 | ma Morocco | 35,000 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 16:00 | Benin bj | 1–0 | sd Sudan | 26,000 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 17:00 | Guinea gn | 1–2 | ci Côte d'Ivoire | 14,000 | Stade du 28 Septembre | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 17:00 | Nigeria ng | 3–0 | ke Kenya | 60,000 | Abuja National Stadium | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 19:00 | Mali ml | 0–2 | gh Ghana | 40,000 | Stade du 26 Mars | | Match Report | |
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| Third round | 2 | Sun | 2009-06-07 | 20:30 | Algeria dz | 3–1 | eg Egypt | 26,500 | Stade Mustapha Tchaker | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 3 | Sat | 2009-06-20 | 14:00 | Zambia zm | 0–2 | dz Algeria | 9,000 | Konkola Stadium | | Match Report | |
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| Third round | 3 | Sat | 2009-06-20 | 16:00 | Kenya ke | 2–1 | mz Mozambique | 15,000 | Safaricom Stadium Kasarani | | Match Report | |
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| Third round | 3 | Sat | 2009-06-20 | 18:00 | Burkina Faso bf | 2–3 | ci Côte d'Ivoire | 33,056 | Stade du 4 Août | | Match Report | |
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| Third round | 3 | Sat | 2009-06-20 | 19:00 | Morocco ma | 0–0 | tg Togo | 22,000 | Stade Prince Moulay Abdallah | | Match Report | |
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| Third round | 3 | Sat | 2009-06-20 | 19:10 | Tunisia tn | 0–0 | ng Nigeria | 45,000 | Stade Olympique de Radès | | Match Report | |
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| Third round | 3 | Sat | 2009-06-20 | 20:30 | Sudan sd | 0–2 | gh Ghana | 30,000 | Al-Merreikh Stadium | | Match Report | |
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| Third round | 3 | Sun | 2009-06-21 | 17:00 | Guinea gn | 2–1 | mw Malawi | 14,000 | Stade du 28 Septembre | | Match Report | |
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| Third round | 3 | Sun | 2009-06-21 | 19:00 | Mali ml | 3–1 | bj Benin | 40,000 | Stade du 26 Mars | | Match Report | |
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| Third round | 3 | Sun | 2009-07-05 | 20:30 | Egypt eg | 3–0 | rw Rwanda | 18,000 | Cairo Military Academy Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 4 | Sat | 2009-09-05 | 14:30 | Malawi mw | 2–1 | gn Guinea | 15,000 | Kamuzu Stadium | | Match Report | |
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| Third round | 4 | Sat | 2009-09-05 | 15:30 | Rwanda rw | 0–1 | eg Egypt | 20,000 | Stade Amahoro | | Match Report | |
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| Third round | 4 | Sat | 2009-09-05 | 15:30 | Gabon ga | 0–2 | cm Cameroon | 10,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | |
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| Third round | 4 | Sat | 2009-09-05 | 17:00 | Côte d'Ivoire ci | 5–0 | bf Burkina Faso | 38,209 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 15:00 | Mozambique mz | 1–0 | ke Kenya | 35,000 | Estádio da Machava | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 15:30 | Togo tg | 1–1 | ma Morocco | 24,651 | Stade de Kégué | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 16:00 | Benin bj | 1–1 | ml Mali | 33,000 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 17:00 | Nigeria ng | 2–2 | tn Tunisia | 52,000 | Abuja National Stadium | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 17:00 | Ghana gh | 2–0 | sd Sudan | 38,000 | Accra Sports Stadium | | Match Report | |
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| Third round | 4 | Sun | 2009-09-06 | 22:00 | Algeria dz | 1–0 | zm Zambia | 30,000 | Stade Mustapha Tchaker | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 3 | Wed | 2009-09-09 | 15:30 | Cameroon cm | 2–1 | ga Gabon | 38,000 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 5 | Sat | 2009-10-10 | 14:00 | Zambia zm | 0–1 | eg Egypt | 10,000 | Konkola Stadium | | Match Report | |
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| Third round | 5 | Sat | 2009-10-10 | 14:30 | Malawi mw | 1–1 | ci Côte d'Ivoire | 25,000 | Kamuzu Stadium | | Match Report | |
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| Third round | 5 | Sat | 2009-10-10 | 15:30 | Gabon ga | 3–1 | ma Morocco | 14,000 | Stade Omnisport Président Omar Bongo Ond... | | Match Report | |
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| Third round | 5 | Sat | 2009-10-10 | 15:30 | Cameroon cm | 3–0 | tg Togo | 37,400 | Stade Omnisport Ahmadou Ahidjo | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 16:00 | Benin bj | 1–0 | gh Ghana | 20,000 | Stade de l'Amitié Général Mathieu Kéréko... | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 17:00 | Nigeria ng | 1–0 | mz Mozambique | 13,000 | Abuja National Stadium | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 17:00 | Tunisia tn | 1–0 | ke Kenya | 50,000 | Stade Olympique de Radès | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 17:00 | Guinea gn | 1–2 | bf Burkina Faso | 5,000 | Accra Sports Stadium | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 18:00 | Mali ml | 1–0 | sd Sudan | 15,000 | Stade du 26 Mars | | Match Report | |
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| Third round | 5 | Sun | 2009-10-11 | 19:15 | Algeria dz | 3–1 | rw Rwanda | 22,000 | Stade Mustapha Tchaker | | Match Report | |
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| | | | | | | | | | | | |
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| Third round | 6 | Sat | 2009-11-14 | 15:00 | Mozambique mz | 1–0 | tn Tunisia | 30,000 | Estádio da Machava | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 15:30 | Rwanda rw | 0–0 | zm Zambia | 18,000 | Stade Amahoro | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 15:30 | Morocco ma | 0–2 | cm Cameroon | 17,000 | Complexe Sportif de Fès | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 15:30 | Togo tg | 1–0 | ga Gabon | 10,000 | Stade de Kégué | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 16:00 | Kenya ke | 2–3 | ng Nigeria | 20,000 | Nyayo National Stadium | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 16:00 | Côte d'Ivoire ci | 3–0 | gn Guinea | 28,000 | Stade Félix Houphouët-Boigny | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 16:00 | Burkina Faso bf | 1–0 | mw Malawi | 20,000 | Stade du 4 Août | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 19:30 | Egypt eg | 2–0 | dz Algeria | 75,000 | Cairo International Stadium | | Match Report | |
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| Third round | 6 | Sat | 2009-11-14 | 20:00 | Sudan sd | 1–2 | bj Benin | 600 | Al-Merreikh Stadium | | Match Report | |
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| Third round | 6 | Sun | 2009-11-15 | 17:00 | Ghana gh | 2–2 | ml Mali | 39,000 | Baba Yara Stadium | | Match Report | |
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| | | | | | | | | | | | |
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| Tiebreaking play-off | | Wed | 2009-11-18 | 20:30 | Algeria dz | 1–0 | eg Egypt | 35,000 | Al-Merreikh Stadium (Neutral Site) | | Match Report | |
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